ENTRAF

An Encyclopedia of well-annotated DNA-binding TRanscription factors in Bacteria and Archaea.

Transcription factor information

General information

ENTRAF ID ENTRAF0448
Gene name tnrA
Uniprot ID TNRA_BACSU
Organism Bacillus subtilis (strain 168)
Aminoacid sequence MTTEDHSYKDKKVISIGIVSELTGLSVRQIRYYEERKLIYPQRSSRGTRKYSFADVERLMDIANKREDGVQTAEILKDMRKKEQMLKNDPQVRKKMLEGQLNAHFRYKNR
FASTA file Download
Length 110

Functional information

Function Uniprot Transcription regulator that actives the transcription of genes required for nitrogen assimilation such as nrgAB (ammonium transport), nasABCDEF (nitrate/nitrite assimilation), ureABC (urea degradation) and gabP (GABA transport), during nitrogen limitation. Also represses glnRA and gltAB in the absence of ammonium. On the contrary of the MerR members, which require longer DNA sites for high-affinity binding, TnrA requires a DNA sequence of 17 nucleotides as minimal binding site.
Role Activator; Repressor
Protein family MerR
Structure (PDB ID) 4S0R

References

Pubmed ID 1 8799114
Pubmed ID 2 9384377
Pubmed ID 3 12823818
Pubmed ID 4 10864496
Pubmed ID 5 11719184
Pubmed ID 6 9603886
Pubmed ID 7 10231480
Pubmed ID 8 25691471

Experimental evidences

MIC