ENTRAF

An Encyclopedia of well-annotated DNA-binding TRanscription factors in Bacteria and Archaea.

Transcription factor information

General information

ENTRAF ID ENTRAF0515
Gene name fis
Uniprot ID FIS_ECOLI
Organism Escherichia coli (strain K12)
Aminoacid sequence MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
FASTA file Download
Length 98

Functional information

Function Uniprot Activates ribosomal RNA transcription, as well other genes. Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin-mediated DNA inversion. Prevents initiation of DNA replication from oriC. Binds to hundreds of transcriptionally active and inactive AT-rich sites, approximately half its binding sites are in non-coding DNA, which only accounts for about 10% of the genome.
Role Activator; Repressor
Protein family Fis
Structure (PDB ID) 1ETK

References

Pubmed ID 1 26527724
Pubmed ID 2 16963779

Experimental evidences

BPP, SM, GEA